Insertion junction: CLIP2.066348_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066348
Chromosome:chromosome 1
Location:7591542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800139 (1 of 1) IPR026741//IPR026937//IPR027417 - Protein strawberry notch // Strawberry notch, helicase C domain // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGACGCGGCGGCGATGGACGCGGCGACGGCCATGGACGCGCAGCAGC
Internal bar code:GAGATAGCGGTTACCTATCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1281
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGTCGTCGTCGTCATC
Suggested primer 2:GTCTGGAGGACCTGGAGGAT