Insertion junction: CLIP2.066349_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066349
Chromosome:chromosome 12
Location:8576194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGAAGGTCGACAGTGTCGCAGCCGGGCTGAGTGACGTAAGGCGGTTT
Internal bar code:CAGGGTTTCTATCTGATGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACAGCTGTGTCTGTGTG
Suggested primer 2:AATTCCCCTACCCCCTACCC