Insertion junction: CLIP2.066364_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066364
Chromosome:chromosome 16
Location:5979611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678600 (1 of 3) PTHR20961:SF0 - EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE 5'UTR
Cre16.g678650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGTTGTAATATGCTACAAGCTAGATCCAGCGTCCTAGTTTCGATTAT
Internal bar code:GGGCACCGGACCTTTCAGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTGATGCGTGTTGAGG
Suggested primer 2:GCCAGGACGGGATATACAGC