Insertion junction: CLIP2.066364_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066364
Chromosome:chromosome 16
Location:5979629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678600 (1 of 3) PTHR20961:SF0 - EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE 5'UTR
Cre16.g678650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACGCGCTTGTTTAGTTCGATCAACTCGTGGAACCTGGAGTTCAGCT
Internal bar code:TAAGAGGCGCAAGGATACACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2658
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGGACGGGATATACAGC
Suggested primer 2:AGGTCTGATGCGTGTTGAGG