Insertion junction: CLIP2.066366_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066366
Chromosome:chromosome 6
Location:6610157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294600 (1 of 3) PF15227 - zinc finger of C3HC4-type, RING (zf-C3HC4_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGACCCTACAGAGGTCTGGCCCCCGCAGCTGAGCCGGTGTGGGA
Internal bar code:AAAGCTGAGTTTCGGTTTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:94.5652
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATAGCGAGCTTAGCAA
Suggested primer 2:TTGCTTGAGGACAGAGCCTG