Insertion junction: CLIP2.066375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066375
Chromosome:chromosome 1
Location:6624326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTCTCTGTCGGGATTTCTTTCTTTTCTCTGTGTTGCGCGCGGTGTT
Internal bar code:GCGTCCTAGATCTGGGGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2052
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACAAACACGCTGACCAG
Suggested primer 2:ATGTTTGCGGCCCCTTATCA