Insertion junction: CLIP2.066379_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066379
Chromosome:chromosome 6
Location:6357389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293150 PGM12 (1 of 2) PTHR23029:SF12 - PHOSPHOMUTASE PMU1-RELATED; Phosphoglycerate mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTACCAAACGAAGCCATATTAAGGAATTCGGCCACTGACGCCGCCCCT
Internal bar code:ATCGGAGTTTATTATTTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1535
LEAP-Seq percent confirming:63.8298
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCGTCATATTACGGGAA
Suggested primer 2:AGCGCTCGTATCTTCCTTCG