Insertion junction: CLIP2.066380_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066380
Chromosome:chromosome 16
Location:3888640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689050 ACX1,ACO1 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PTHR10909//PTHR10909:SF250 - ELECTRON TRANSPORT OXIDOREDUCTASE // PEROXISOMAL ACYL-COENZYME A OXIDASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGACCAGGCACCCCCGCATTGGCCCTCCTACGCCCCCGCCCTCGCT
Internal bar code:ATTTGAGTGGGTATTCCCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGGATGAGAGGTGGGG
Suggested primer 2:ATGGTTTGCGGGCTATGGAA