Insertion junction: CLIP2.066381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066381
Chromosome:chromosome 6
Location:6192865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292050 MMP21 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACTACATAACACTTATACAGTGTCGGAGCGTGTTGTGACGGCACCGC
Internal bar code:TCTACGGGCAACGGGCTCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGATGGAAAGCTCCCGGG
Suggested primer 2:GCGTAGTCGTGAACATTCGC