Insertion junction: CLIP2.066382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066382
Chromosome:chromosome 16
Location:7965409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691327 5'UTR
Cre16.g691440 FAP43 Flagellar Associated Protein 43; (1 of 2) PTHR14885//PTHR14885:SF1 - UNCHARACTERIZED // WD REPEAT-CONTAINING PROTEIN 96 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGTAAACGTTTGGTTGCAAATCCTCGCTCCGGGACTCTGCCCTCCTG
Internal bar code:GCTGTCTGCCAAGCCTGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTTCCTCTAACTGCCGC
Suggested primer 2:CGAAAGGAAGGTCCAAGGCT