Insertion junction: CLIP2.066399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066399
Chromosome:chromosome 6
Location:5147434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283200 (1 of 1) PTHR13271//PTHR13271:SF14 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCACGCGGCCATCTGGTCACAACACACACCTGCACGAATGCCAGCC
Internal bar code:CATATAGTGAGGGCGTATGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3563
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGCAATCAAGATGCTCG
Suggested primer 2:TGTGGCTTCTGGTGGGTTTT