Insertion junction: CLIP2.066403_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066403
Chromosome:chromosome 13
Location:1855850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575300 (1 of 1) K08876 - SCY1-like protein 1 (SCYL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTATCAAGGCAAGGCAGATGAGCGCACCCTGTGGCTTCGCCTTGTG
Internal bar code:TAGTACTCATACCCCTTGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGTATGGAAACTGCGT
Suggested primer 2:ATTCCACCTTTGCCGAGGAG