Insertion junction: CLIP2.066405_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066405
Chromosome:chromosome 12
Location:6236985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACAGCCGGACAGGGCATCGTCAACTTTGGTTACAACTGTGGCCGTCG
Internal bar code:GCATAACCATTAATGTAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2941
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAATTGTCGAGACCCA
Suggested primer 2:AGGTGGCTGGGTTGATAACG