Insertion junction: CLIP2.066409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066409
Chromosome:chromosome 3
Location:9188653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800416 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTTTAAATGCACCACTGATACGCTCCTACCGATTGGCATTCTTGTCC
Internal bar code:AAAGTGAGTTCCCCTTGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:55.8824
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCGTAATCCTCGCGCC
Suggested primer 2:GCTCAAGTCTCTTCGCCAGT