Insertion junction: CLIP2.066416_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066416
Chromosome:chromosome 2
Location:2963241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095294 (1 of 1) PTHR14187//PTHR14187:SF51 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAATACCACTCACCAAGCTTGTCGAGGATGGAGCCGAAGACGCGCTG
Internal bar code:TCCACATTGAATTGATAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1891
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTTTCTGAGCGCTGCCT
Suggested primer 2:CCATCAGAACGCGTCACAAC