Insertion junction: CLIP2.066424_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066424
Chromosome:chromosome 2
Location:6759346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387726 AST1 Aspartate aminotransferase; (1 of 1) K14454 - aspartate aminotransferase, cytoplasmic (GOT1) 5'UTR
Cre09.g387763 (1 of 1) 1.1.1.94 - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) / L-glycerol-3-phosphate:NAD(P) oxidoreductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATAAGGTTTGCCATCAACAGTTCAGAGTCACTTACCCCCTGCCAACT
Internal bar code:TCGAGAACGCGGTGGTAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTTGTCGGCGTTTGTCT
Suggested primer 2:CTGTTGATCGCCTCCACTGT