Insertion junction: CLIP2.066433_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066433
Chromosome:chromosome 10
Location:5942247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461050 ATPvA1,ATPVA1 Vacuolar ATP synthase subunit A; (1 of 1) K02145 - V-type H+-transporting ATPase subunit A (ATPeV1A, ATP6A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAGGGACACGAACGGGACCTGACCGGAGACCCGCCCGACGCAGACAA
Internal bar code:TCTTTTAAGGCATTTAATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:341
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:341

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCCTGTAGAGAGGGTGG
Suggested primer 2:GATACGGCGGGATTTCACCT