Insertion junction: CLIP2.066433_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066433
Chromosome:chromosome 10
Location:5942248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461050 ATPvA1,ATPVA1 Vacuolar ATP synthase subunit A; (1 of 1) K02145 - V-type H+-transporting ATPase subunit A (ATPeV1A, ATP6A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGACCAGCCCACGACCCAGCCTTGTGGCCCCGCCCGTGGACTCTGA
Internal bar code:TCTTTTAAGGCATTTAATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1625
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GATACGGCGGGATTTCACCT
Suggested primer 2:AGAGCCTGTAGAGAGGGTGG