Insertion junction: CLIP2.066435_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066435
Chromosome:chromosome 16
Location:6605524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGATGGACTTTTGGGATTGCGGCTGCGGACGGAGATTGAGTTTCAG
Internal bar code:GGGCACAGCAGGACTTTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:2.43902
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGAGTGGACATCGTTGAA
Suggested primer 2:GGGATAGCTGGCTAGTGCTG