Insertion junction: CLIP2.066445_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066445
Chromosome:chromosome 11
Location:4412867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g483100 (1 of 1) IPR019931 - LPXTG cell wall anchor domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCACAGCACCGCCGCAAAGGAGTAGATGTCCTGTGAGGGCCAGCAAA
Internal bar code:TTAGGAGTAAAGGCAGTCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5416
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTTGGAGCTGTTCACG
Suggested primer 2:TCCCGCTCTAGCCTTTGTTG