Insertion junction: CLIP2.066447_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066447
Chromosome:chromosome 1
Location:6852226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049132 (1 of 1) PTHR23097//PTHR23097:SF105 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGGCATGAACAGCGCACTGCAGCAGTGACCACTGCGGCGCGACTGCA
Internal bar code:AAATCGATCAGGGGTATGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCGCAATGTCAAACACC
Suggested primer 2:CCATTGAAGCCGGCTAATGC