Insertion junction: CLIP2.066455_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066455
Chromosome:chromosome 3
Location:8651370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209953 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGCGGCGTTTGCCCCACACAAGGCTCGGGCAAACCGTGAAGTAGAT
Internal bar code:GGACTTGTGCTGCCTATATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTCCACCCAAACGAGC
Suggested primer 2:ACAGCGACTTCCACGTTGAT