Insertion junction: CLIP2.066456_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066456
Chromosome:chromosome 12
Location:4839178
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g523500 DER1 DERLIN-1 involved in ER-associated degradation system; (1 of 2) K13989 - Derlin-2/3 (DERL2_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGCCCCCCACCTTGATGACCCAGTTGAATGAGAACTTGCCCATGAAG
Internal bar code:GTAAGGTAGCGCGGGCGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:1.11111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGCTGTTCATCGTCAC
Suggested primer 2:GGGGTGTGGTAGTGTGAGTG