Insertion junction: CLIP2.066464_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066464
Chromosome:chromosome 9
Location:4661803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401886 (1 of 1) 1.11.1.5 - Cytochrome-c peroxidase; Putative Ascorbate peroxidase 3'UTR
Cre09.g801060 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAAACGTCCACAACAATATACAGGACGCGCCGCCCTGGGCGGGCTGG
Internal bar code:CTCTAAGAAAGCTGTTATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTGGATATGACGGGGT
Suggested primer 2:TTGTTGCGTGCGTTTAGGTG