Insertion junction: CLIP2.066479_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066479
Chromosome:chromosome 11
Location:291780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467563 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTAGCCAAGTAGGTGGCTAGGCCGGGGCTGCTACCACGCGCAAGAGCT
Internal bar code:TCGCAGTCTTAGCTACTGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTCCGGCATCCATCTC
Suggested primer 2:AAAAGCTACGGCCTGCAGAT