Insertion junction: CLIP2.066488_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066488
Chromosome:chromosome 12
Location:2282244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508250 (1 of 1) PTHR22975:SF9 - F6D8.33-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCATTTTGCTGCCTCCCTAGTACCATATACATAGAGTCACGCGTCTG
Internal bar code:GTTTACTCGCGGTATCTACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCCGGTGATCAGCTAGC
Suggested primer 2:CTTACTGTGAAGCGCGATGC