Insertion junction: CLIP2.066491_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066491
Chromosome:chromosome 2
Location:1138952
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain 5'UTR
Cre02.g080900 PRX4 (1 of 1) PTHR10430//PTHR10430:SF19 - PEROXIREDOXIN // SUBFAMILY NOT NAMED; Peroxiredoxin, type II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGTAACCACATCTGTGATAAGGATTGCTTTGGGGAACAGAATGGCC
Internal bar code:GGTACGGCTTTCGGTTCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTTGTGAGGGCGGGTTC
Suggested primer 2:AAGGTGACGGACTGCAAGAG