Insertion junction: CLIP2.066492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066492
Chromosome:chromosome 11
Location:4201595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481600 GAS28 Hydroxyproline-rich glycoprotein, stress-induced; (1 of 71) PF12499 - Pherophorin (DUF3707) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGAATTAACGCGAGTGTATCGGCCGGGTAACGCGACGGGCAACGCGT
Internal bar code:TCATAAGTGCGATTCGACTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAAAGTAGTTGGGGGCG
Suggested primer 2:CACATACATGGCCTTGGGGT