Insertion junction: CLIP2.066495_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066495
Chromosome:chromosome 10
Location:835172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423350 (1 of 1) PF07052 - Hepatocellular carcinoma-associated antigen 59 (Hep_59) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGAGGGTGTGCTGTATCGACACTGGAGGCAGAGGCGGGAGGCGGGCG
Internal bar code:AAGTGGTCGATAGACCACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2403
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCTGGATTTGCGCGGTC
Suggested primer 2:TTGGCAGTCCTGGGTTTGTT