Insertion junction: CLIP2.066496_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066496
Chromosome:chromosome 5
Location:1895004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGACCATCGTCCCCGCATTGGGCCCTGCACGGCTAACTTCCCTTTCA
Internal bar code:GGGAGCTTAGTTTTTTAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1695
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCTTTACCTATGCTGC
Suggested primer 2:CGATGGTGAGGAATACCCGG