Insertion junction: CLIP2.066497_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066497
Chromosome:chromosome 7
Location:3557881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336600 AMD1,MAN1 (1 of 1) K01230 - mannosyl-oligosaccharide alpha-1,2-mannosidase (MAN1); Alpha-1%252C2-mannosidase I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTACACCACAGGCACGATCCGCCGTGCATCTCATCTCCGCCGGCGCT
Internal bar code:AACCGACCTCGTCCGAACTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGATCCTGGAGCGGTACC
Suggested primer 2:TGGCCTAGTCAGTATGCCCT