Insertion junction: CLIP2.066500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066500
Chromosome:chromosome 6
Location:7008176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297150 RWP9 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTGCAAAACCGGGACACATGATGGAAAGCACCGCATGCGGCTCTGCC
Internal bar code:GGCTCGATAGCGGAGATTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGTACCTGCCCATAGAC
Suggested primer 2:CACCCACCCAAATGTGCAAG