Insertion junction: CLIP2.066500_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066500
Chromosome:chromosome 6
Location:7008179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297150 RWP9 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACTACGTATTGCAAACGACCCCAGAAGAATTTCAGCGCAGCACCTCA
Internal bar code:ATTTTGATCTTGAAGCTGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2811
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACCCAAATGTGCAAG
Suggested primer 2:GCTCGTACCTGCCCATAGAC