Insertion junction: CLIP2.066501_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066501
Chromosome:chromosome 5
Location:635615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245150 (1 of 30) PF13450 - NAD(P)-binding Rossmann-like domain (NAD_binding_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCGCCAGGTGTACGCTGGTGGTCGCGGGGCCGGGACAGGGTGTGGA
Internal bar code:AAGCCTAGACACTGTCGTAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCCAAGCAAGCAGTCGA
Suggested primer 2:GTGCAATGTCTTGTGCCGTT