Insertion junction: CLIP2.066512_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066512
Chromosome:chromosome 10
Location:4832226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCTAGATTAAGATGTGTCCATGCATGTTTTTGTGACCCGGCGGCCCT
Internal bar code:TTGTCGTTTCCGCAATAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1856
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCGATGTCTCTACAGTC
Suggested primer 2:TCATCAGGGTGTGCACTCAC