Insertion junction: CLIP2.066513_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066513
Chromosome:chromosome 2
Location:7866497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGTTCCCCCTGGGCAACCAAAGCTGAACATGTTAAGTGCGCTTGAC
Internal bar code:TGATGTGGCCTGCTCCTGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCAGAATAAATGGCGG
Suggested primer 2:AGTCACAAGCGGAGAACCAG