Insertion junction: CLIP2.066516_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066516
Chromosome:chromosome 1
Location:6302999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044750 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGCCCCGGCATCCACAGTCTACGTAGCCAGCGTACCAGGCGGGTAGA
Internal bar code:CTGTGCGCTGGGTAAACGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1315
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGTGCAACGAGACTGGG
Suggested primer 2:GAGTATCGAGGTCAGCGTGG