Insertion junction: CLIP2.066529_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066529
Chromosome:chromosome 3
Location:8744858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208049 (1 of 1) IPR000104//IPR000644//IPR007263 - Antifreeze protein, type I // CBS domain // Protein of unknown function DUF393 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTGTCCTTATGCTCCTAGAGAATGCGAGGAGCTCGGGTCGCTACTCC
Internal bar code:ATTCGGCAGCTCGCATGCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2232
LEAP-Seq percent confirming:92.7273
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTGCTGTTCAGGAGGGT
Suggested primer 2:GTACGGACAGGGTGATTCGG