Insertion junction: CLIP2.066529_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066529
Chromosome:chromosome 3
Location:8744860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208049 (1 of 1) IPR000104//IPR000644//IPR007263 - Antifreeze protein, type I // CBS domain // Protein of unknown function DUF393 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCGCTTGCTAGGGGCCGACAGTGTCGACCCGCCCACAGTAAAGGGC
Internal bar code:ATTCGGCAGCTCGCATGCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2201
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGACAGGGTGATTCGG
Suggested primer 2:CGATTGCTGTTCAGGAGGGT