Insertion junction: CLIP2.066534_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066534
Chromosome:chromosome 11
Location:3073769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGCTTGGTCGGCCGCTCGAAGCCCATCAGCTTCAGCAGGAGGAGCA
Internal bar code:GCAAGAAGGGATCTCGGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1546
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTTATGTTTGCGCGTACCGG
Suggested primer 2:GCTCGCGTTGCCTAATTGAG