Insertion junction: CLIP2.066542_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066542
Chromosome:chromosome 3
Location:6602685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800367 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCCTGCAGCTGTATTTGCTGTGTAAGGGTTTGACGCGTGTACGGCT
Internal bar code:GCTGACATTCTCTCTGCCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2880
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTAGTTGCCAGGACGT
Suggested primer 2:AGTGCTGGTGAGTCCGAATG