Insertion junction: CLIP2.066546_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066546
Chromosome:chromosome 12
Location:9527443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540200 HEL58 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGATGATTTTACTGAGTAAGCAGCAACTGGGTTTGCAACTTGCTGTAC
Internal bar code:TTTATAATGTAACTTATACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTAGCACACGCCCGTAA
Suggested primer 2:CCCGGCTACTGCTTCAAGAA