Insertion junction: CLIP2.066563_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066563
Chromosome:plastome
Location:102594
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802309 2716996,petG,ChreCp045 (1 of 1) K02640 - cytochrome b6-f complex subunit 5 (petG); cytochrome b6/f complex subunit V 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGAAAGCACTTTAAGTGGTACACGTTAGATATTATTTATACGAGTA
Internal bar code:CCGCAGTATAGGATTATAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAACAAATCCCCGGCAA
Suggested primer 2:CTGCAGCTTTTGGGCAAGAA