Insertion junction: CLIP2.066566_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066566
Chromosome:chromosome 6
Location:1044639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800616 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCGCCTGCAACCCCTGCCGCTCCACTGAATGCGTCAGCCTGCAGGG
Internal bar code:GGAGTTTAAGGTTGTCTAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTATGCTGACCTGGGCTA
Suggested primer 2:CTATCGCACCTCGCATCCAT