Insertion junction: CLIP2.066575_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066575
Chromosome:chromosome 16
Location:1648996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGGGGCGCAGTGCCATGGTGGGTTGCGTGTGTGGACCCGCCATTGCG
Internal bar code:GGCGTGCTCACTTCTAGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGTATTGCTGCATGCC
Suggested primer 2:CATGCGTCGCCTAGCTCTTA