Insertion junction: CLIP2.066595_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066595
Chromosome:chromosome 5
Location:2188390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237450 PSRP1 Plastid-specific ribosomal protein 1; (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTACAAACCAAGCAATCTATCAACAGCTATCTTAACGTTCAACGTTT
Internal bar code:ATGGGGGGGGGGCTTGCTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1597
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTAGCTCACCAGGTGCG
Suggested primer 2:AGACTTGGTGAGCACGTGAG