Insertion junction: CLIP2.066596_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066596
Chromosome:chromosome 5
Location:2257379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238000 (1 of 3) IPR006502//IPR011705 - Protein of unknown function PDDEXK-like // BTB/Kelch-associated 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATTTGATGCTCGGCTAGGGATTCGTTTTGTACATTCACGCTCCGCAT
Internal bar code:CTGGGGTGTAAGTTCAGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1536
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGCATGCGCTAACGTAC
Suggested primer 2:GGCTGTGCGTAGATTGCATG