Insertion junction: CLIP2.066611_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066611
Chromosome:chromosome 8
Location:1876851
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g367400 LHCSR3,LHCSR3B,LI818r Stress-related chlorophyll a/b binding protein 3; (1 of 3) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGTGGCGTGCAAGTGAACTGAAGCAAGTGCGTAGCAGGCGAGTGCG
Internal bar code:GGGATAGGGACTGTCAATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGGCCTGAAAAGAAGAT
Suggested primer 2:AAGTGCGGACGGTACACAAT