Insertion junction: CLIP2.066629_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066629
Chromosome:chromosome 7
Location:2895076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332500 AXT2 (1 of 3) PTHR10994:SF69 - PROLINE-RICH PROTEIN 18; Arabinose chain extension enzyme for HRGP 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCATAATATGTCGCCTTACCGAAAGCGCTTAAACCGCATCCATTCTT
Internal bar code:GGTAAGGGAACGGTTTCCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1148
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACACGACATAGCAGCCA
Suggested primer 2:ATGTTGAAGGATGGGGCAGG