Insertion junction: CLIP2.066630_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066630
Chromosome:chromosome 9
Location:4539447
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g401108 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCGCTCGCCGTCAGCGCCTGCGCGGGCGGGCAGGGCCGCGTGCTGA
Internal bar code:TTTTGAACGGACAAACCTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATCCTCCTCCTGTCCA
Suggested primer 2:TCGTCTAGACCGATGCAACG